Table 2: Twenty-three reference sequences

Sequence Checksum Name (Accession Number)*
ancD1 2EC7D592 00ZA1210MB (AY463221)
04ZASK139B1 (AY878072)
ancD18 AEC6CE47 99BW46424 (AF443084)
00BW18595 (AF443099)
ancD29 AAE47647 00ZA1171MB (AY463232)
04ZASK170B1 (DQ093595)
ancD33 2062B32B 02YE511 (AY795906)
99ET7 (AY255824)
ancD34 CC3851E7 04ZASK144B1 (AY703911)
04ZASK156B1 (DQ011171)
ancD41 F9E88F14 00ZA1119MB (AY463229)
04ZASK132B1 (DQ093594)
ancT1 70EA53B4 00ZA1195MB (AY463220)
01ZAJ54Ma (AY463223)
03ZAPS077B1 (DQ093591)
ancT2 23B1E2D5 03ZASK020B2 (AY878064)
03ZASK061B1 (AY901968)
04ZAPS170B1 (DQ164116)
ancT8 227B8DAF 01TZA93 (AY253303)
03ZASK232B1 (DQ093589)
HIV1084i (AY805330)
ancT13 F771258A 00BW07621 (AF443088)
00BW18802 (AF443100)
99BW47547 (AF443086)
ancT15 2C6BB1E5 01TZBD16 10 (AY253320)
97TZ04 (AF361874)
98TZ017 (AF286235)
ancT16 6CA2549E 99ET1 (AY255823)
99ET14 (AY255825)
ETH2220 U46016)
ancT17 D7602B65 96BW17 (AF110980)
00BW147127 (AF443091)
03ZASK029B2 (AY772691)
ancT19 DBC6ED74 03ZASK110B1 (DQ056411)
03ZASK211B1 (DQ093601)
03ZASK006B2 (AY878056)
ancQ3 929ED7F5 99BW393212 (AF443083)
00BW2127214 (AF443105)
00BW38193 (AF443108)
KER2010 (AF457054)
ancQ4 E667CCF1 00BW20361 (AF443102)
00BW38428 (AF443109)
04ZASK173B1 (DQ093604)
96BW15C02 (AF110974)
ancQ7 D61168ED 00ZA1168MB (AY463231)
03ZASK116B1 (AY772696)
03ZASK120B1 (DQ011176)
04ZASK131B1 (DQ056412)
ancG10 44B44832 00BW17956 (AF443097)
00BW20636 (AF443103)
96BW1104 (AF110969)
98BWMC134 (AF443077)
96BWMO1 5 (AF443074)
ancIN D2724A 01IN565 10 (AY049708)
93IN101 AB023804)
93IN904 (AF067157)
93IN905 (AF067158)
93IN999 (AF067154)
94IN11246 (AF067159)
95IN21068 (AF067155)
98IN022 (AF286232)
mIDU101 3 AB097871)
ancSAM C18ABE78 04BR013 (AY727522)
04BR021 (AY727523)
04BR038 (AY727524)
04BR073 (AY727525)
04BR137 (AY727526)
04BR142 (AY727527)
92BR025 U52953)
98BR004 (AF286228)
ARG4006 (AY563170)
TRA3011 (AY563169)
00BW20872 92F0522C (AF443104)1
SK005B2 1BEE86A9 03ZASK005B2 (DQ011175)2
SK213 8226F093 03ZASK213B1 (DQ093607)2

* Names of sequences in clades represented by "anc" sequences, except as below:
1Accession number for 00BW20872
2Full name and accession number

Downloadable alignments:

fasta gde
nbrf nexus