Validation set in FASTA format
"multiple names after '>' are isolates with identical V3 loops; for Genbank accessions, see ""validation analysis"" sheet"
>C.ZM.89.ZM20 phen SI
CARPGNNTRKSIRIGPGQTFFATGAIIGDIRQAHC
>C.ZW.01.TC28_2 phen SI
CGRPNNHRIKGLRIGPGRAFFAMGAIGGEIRQAHC
>C.ZW.01.TC03_1 phen SI
CIRPGNNTSKSIRIGQRRPVYVH-KIIGDIRQAHC
>C.ET.97.PHD79C1 phen SI
CIRPNNNTRKSVRIGPGQAFYATGDIIGDIRQAHC
>C.ZW.01.TC28_1 phen SI
CMRPNNNTRKSVRIGPGQTFFATGAIIGNIRQAHC
>AC.RW.92.92RW009_di1sCD phen SI
CPRPNNNTRKSVHIGPGQAFYATGDVIGDIRQAYC
>AC.RW.92.92RW009_1gCR AC.RW.92.92RW009_1gER AC.RW.92.92RW009_14 AC.RW.92.92RW009_2 AC.RW.92.92RW009_3 AC.RW.92.92RW009_4 A1C.RW.92.92RW009_06 phen SI SI SI SI SI SI SI
CSRPNNNTRKSVHIGPGQAFYATGDVIGDIRQAYC
>C.ZW.01.TC22 phen SI
CTRPGNKTRQSIRIGRGQSFHATGAIIGDIRKAYC
>C.ZW.01.TC30 phen SI
CTRPGNNT-----IGPGRTFYATDRIIGDIRQAHC
>C.ZW.01.TC29 phen SI
CTRPGNNTRKGLRIGPGRTIYATEVTVGDIRQAYC
>C.ZA.99.DU179 phen SI
CTRPGNNTRKSIRIGPGQAFYTNH-IIGDIRQAYC
>A1C.SE.96.SE9488 phen SI
CTRPGNNTRRSVHIGPGQAFYATGDITGDIRKAHC
>C.ZW.01.TC25 phen SI
CTRPGNNTRRSVRIGPGQSFHATGTIIGDIRQAHC
>C.ZW.01.TC03_2 phen SI
CTRPGNNTRTSIRIGPGQTFYTS-KVIGDIRQAHC
>C.ZA.99.ZASW7 phen SI
CTRPGSNKQRNIRIGPGRAFHTNGVI-GDIRKAYC
>C.ZW.01.TC13 phen SI
CTRPNN-TRKSVGIGPGKTFYAHGEVIGNIRQAHC
>C.ZA.99.99ZASW20 C.ZA.99.99ZASW20 phen SI SI
CTRPNNNTRKSIRIGRGQTFYVTGQIIGDVRQAHC
>C.ZW.x.Z2288 phen SI
CTRPNNNTRKSVRIGPGQVFYAN-DIIGDIRQAHC
>C.ZW.01.TC08 phen SI
CTRPNNNTRKSVRIGRGQAIYAKKAIIGDIRQAHC
>C.ZW.01.TC23 phen SI
CTRPNNNTRKSVRIGRGQTFYATG-IVGDIRQAHC
>C.ZW.x.Z748 phen SI
CTRPNNNVRKHIRIGIGKVFYAN-DIIGDIRQARC
>C.ET.97.PHD74E7 phen SI
CTRPNYIKRKSIGIGPGQAFFPRGGIGRDIRQAFC
>C.ZW.01.TC04 phen SI
CTRPSNNTRKSARVGPGQAFYAIKKIIGDIRQAHC
>C.ET.97.074D3 phen SI
CTRPNNNTRKSIGIGPGQAFYARGDIIGDLRQAFC
>C.SN.90.90SE_364 phen NSI
CARPNNNTRKSMRIGPGQTFYATGDIIGDIRQAHC
>C.ZA.99.99ZASW35 phen NSI
CARPNNNTRTSVRIGPGQAFYATNDIIGKIRQAHC
>C.ZW.01.TC26 phen NSI
CIRPGNNTRKSVRIGPGQAFFATGDIIGNIRQAHC
>C.ZA.90.90ZA514 phen NSI
CIRPGNNTRKSVRIGPGQTFFATGEIIGKIREAHC
>C.FR.93.FRMP169 phen NSI
CIRPGNNTRKSVRIGPGQTFYATGDIIGDIRKAYC
>C.ZA.98.98ZA528 phen NSI
CIRPGNNTRQSIRIGPGQTFFATGDIIGDIRQALC
>C.ZW.01.TC19 phen NSI
CIRPGNNTRQSVRIGPGQTFYATGDIIGDIREAHC
>A1CDGKU.ZA.99.CM4 phen NSI
CIRPTNNTRQSIRFGPGQVFFGTDV-IGDIRQAHC
>C.ZA.98.TV007A C.ZA.98.TV007B phen NSI NSI
CPRPNHNTRRSIRIGPGQAFYATGDIIGDIRQAHC
>C.ZW.01.TC17 phen NSI
CTR-GNNTRKSVRIGPGQTFYATGEIIGDIRKAHC
>C.ZA.99.99ZASW38 phen NSI
CTRPGNNPRKSVRIGPGQAFYATGDIIGDIRQAYC
>C.FR.90.FRMP19 phen NSI
CTRPGNNTRESIRIGPGQTFYATGDIIGDIRQAHC
>C.ZW.01.TC35 phen NSI
CTRPGNNTRKSIRIGPGQAFYATGEIIGDIRQAHC
>C.ZW.01.TC31 phen NSI
CTRPGNNTRKSIRIGPGQAFYATGGIIGDIRQAHC
>C.FR.93.FRMP129 phen NSI
CTRPGNNTRKSIRIGPGQTFYATGDIIGDIRQAHC
>C.FR.92.FRMP148 phen NSI
CTRPGNNTRKSMRIGPGQTFYATGAIIGDIRQAHC
>C.ZA.99.99ZASW38 phen NSI
CTRPGNNTRKSVRIGPGQAFYATGDIIGDIRKAYC
>C.ZA.92.92ZA517 phen NSI
CTRPGSNTRKSIRIGPGQAFFATGDIIGDIRQAHC
>C.FR.92.FRMP41 phen NSI
CTRPHNNTRKSIRIGPGQTFYATGDIIGDIRQAHC
>C.ZA.98.98ZA502 phen NSI
CTRPHNNTRKSVRIGPGQAFYATGDIIGNIRQAHC
>C.MW.93.960 phen NSI
CTRPNN-TRKSIRIGPGQTFYATNEIIGN-REAHC
>C.ZW.01.TC39 phen NSI
CTRPNNN-RESVRIGPGQVFYA-NGIIGDIRQAHC
>C.ZW.01.TC24 phen NSI
CTRPNNNTRDSVRIGPGQVFYANKGIIGDIRQAHC
>C.ZW.01.TC12 phen NSI
CTRPNNNTRESVRIGPGQVFYATGDIIGNIRQAHC
>BC.BR.92.92BR023 BC.BR.92.92BR023 phen NSI NSI
CTRPNNNTRKSIHIGPGKAFYATGEIIGNIRQAYC
>C.ZA.98.TV014 phen NSI
CTRPNNNTRKSINLGQGRAWYATGAIIGDIRQAHC
>C.ET.97.085 phen NSI
CTRPNNNTRKSIR-GPGQTFYATGDI-GNIRQAHC
>C.ZA.98.TV008A C.ZA.98.TV008B phen NSI NSI
CTRPNNNTRKSIRIGPGQTFFATNDIIGDIRQAYC
>C.ZW.01.TC07 phen NSI
CTRPNNNTRKSIRIGPGQTFYATGDIIGNIRQAHC
>C.ZW.01.TC27 phen NSI
CTRPNNNTRKSIRIGPGQVFYAPGDIIGDIRQAHC
>C.ZW.01.TC34 phen NSI
CTRPNNNTRKSIRIGPGQVFYATGEIIGDIRQAHC
>C.ZW.01.TC11 phen NSI
CTRPNNNTRKSIWLGPGQAFYA-N-IIGDIRQA-C
>C.ZA.98.98ZA445 phen NSI
CTRPNNNTRKSMRIGPGQTFFATGDIIGNIRQAHC
>C.ZW.01.TC36 phen NSI
CTRPNNNTRKSVGIGPGQAIYATGAIIGDIRQAYC
>C.ZA.98.TV001A C.ZA.98.TV001B C.ZA.98.TV001 phen NSI NSI NSI
CTRPNNNTRKSVRIGPGQAFYATNDVIGNIRQAHC
>C.ZW.01.TC02 phen NSI
CTRPNNNTRKSVRIGPGQTFYATNGIIGDIRQAHC
>C.ET.02.02ET_288 phen NSI
CTRPNNNTRQSIRIGPGQTFYATGEIIGDIRQAHC
>C.ZW.01.TC16 phen NSI
CTRPNNNTRRSIRIGPGQAFY-TQKIIGDIRQAHC
>C.ZA.98.TV018 phen NSI
CTRPNNNTRRSMRIRPGQTFYATGEIIGDIRQAYC
>A2C.ZA.98.DU178 phen NSI
CTRPNNNTRRSVRIGPGQAFY-TSDIIGDIREAHC
>C.FR.92.FRMP130 phen NSI
CTRPNNNTRRSVRIGPGQTFYATGAIIGDIRQAHC
>C.ZW.01.TC15 phen NSI
CTRPNNNTRTSVRIGPGQAFY-TQDIIGNIRQAYC
>C.ZW.01.TC33 phen NSI
CTRPNNNTRTSVRIGPGQAFYATGDIIGDIRQAHC
>C.FR.93.FRMP37 phen NSI
CTRPSNNTRKSIRIGPGQAFYATNGIIGDIRAAHC
>C.ZW.01.TC32 phen NSI
CTRPSNNTRKSVWLGPGRAFYT-NKVIGNIRKAHC
>C.FR.91.FRMP197 phen NSI
CTRPYNNTRQSIRIGPGQTFYATGDIIGDIRKAHC
>C.SO.89.89SM_145 phen NSI
CTRYANNTRKSVRIGPGQTFY-TNDIIGDIRQAHC