Improved Coreceptor Usage Prediction
and Genotypic Monitoring of R5-to-X4 Transition by Motif Analysis of HIV-1
env V3 Loop Sequences
Mark A. Jensen1,
Fu-Sheng Li1,§, Angelíque B. van 't Wout1, David C.
Nickle1, Daniel Shriner1, Hong-Xia He1,
Sherry McLaughlin1, Raj Shankarappa2, Joseph B.
Margolick3, and James I. Mullins1
1Department of Microbiology, University of Washington School of
Medicine, Seattle, WA, 2Allegheny-Singer Research Institute,
Pittsburgh, PA and
3Department of Molecular Microbiology
and Immunology, School of Hygiene and Public Health, The Johns Hopkins
University, Baltimore, MD
Current affiliations: §Fred Hutchinson Cancer Research
Center, MW-500, Seattle, WA 98109
Journal of Virology 2003. 77(24):13376-13388
Abstract
Abstract from PubMed Medline
This article is available as HTML
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Additional material from this
study is available.
A beta version of a web based
PSSM Scoring
Tool is available for testing.
*Please address comments or questions concerning this
study to:
Mark A. Jensen, PhD
Department of Biology
Emory University
Atlanta, WA 30322
email: mjense2@emory.edu
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